Cmr guide - Revision history

Sbrandt at 22:29, 3 March 2023

2023-03-03T22:29:54Z

2023-03-03T22:27:02Z

2023-02-27T23:16:48Z

2023-02-27T23:11:18Z

2023-02-27T23:06:42Z

2021-05-04T08:08:33Z

Installing New Models

2021-05-04T08:07:42Z

Instructions

2021-05-04T08:05:01Z

Installing New Models

2021-05-04T08:02:02Z

Instructions

2021-05-04T07:58:26Z

Installing New Models

@@ Line 95: / Line 95: @@
 #*Job history: serves as a debugging tool.
 #*List job output: lists the outputs of the job. Look for the file that has an extension of “.out” and you can 			download the see the output.
-# When a specific job is highlighted under "List all jobs" you can click "Job history" to see the Job's history. You can also click "List job output" to see the files on the remote machine. Selecting a file within this output and clicking download will download that file. If the file selected is "output.tgz" that file will automatically be untarred and its contents placed in $HOME/work/run_dir.
+#*When a specific job is highlighted under "List all jobs" you can click "Job history" to see the Job's history. You can also click "List job output" to see the files on the remote machine. Selecting a file within this output and clicking download will download that file. If the file selected is "output.tgz" that file will automatically be untarred and its contents placed in $HOME/work/run_dir.
-#*Abort: to stop the job. <br> [[File:Downloading.png]]
+#*Abort: to stop the job. <br> [[File:Downloading.png|800px]]
 #*<u>Build Tab:</u> <br> [[File:13.png]]

@@ Line 95: / Line 95: @@
 #*Job history: serves as a debugging tool.
 #*List job output: lists the outputs of the job. Look for the file that has an extension of “.out” and you can 			download the see the output.
-#*Abort: to stop the job. <br> [[File:12.png]]
+# When a specific job is highlighted under "List all jobs" you can click "Job history" to see the Job's history. You can also click "List job output" to see the files on the remote machine. Selecting a file within this output and clicking download will download that file. If the file selected is "output.tgz" that file will automatically be untarred and its contents placed in $HOME/work/run_dir.
 #*<u>Build Tab:</u> <br> [[File:13.png]]

@@ Line 35: / Line 35: @@
 #*For Linux systems, first install Docker Engine then proceed to install Docker Compose.
 #*You can download and install Docker-Compose for Mac, Windows or Linux from Docker-Compose Installation Webpage.
 #Enable the Linux Subsystem (on Windows)
 #*First you need to setup the Windows Subsystem for Linux (WSL)
@@ Line 70: / Line 66: @@
 #*docker-compose will print multiple lines on the screen telling you what it’s doing. One of the lines will have a link. Copy that link and paste it in your browser to open the CMR. <br> [[File:4.png]]
 #Open your browser and paste the link.
 #*You will get the following display from Jupyter Notebook: <br> [[File:5.png]]
 #*Click on model.ipynb. This will open this window. <br> [[File:6.png]]

@@ Line 38: / Line 38: @@
 #*The Tapis/TACC and Agave are software platforms that aim to help researchers more easily leverage powerful supercomputers and integrate and manage data from different and distant sources.
 #*You can create an Agave account on Agave Platform Webpage.
-#*You can create a Tapis/TACC account on TACC User Portal.
+#*You can create a Tapis/TACC account on TACC User Portal: https://portal.tacc.utexas.edu/account-request
 #Enable the Linux Subsystem (on Windows)
 #*First you need to setup the Windows Subsystem for Linux (WSL)

← Older revision		Revision as of 23:06, 27 February 2023
Line 21:		Line 21:
	* '''OpenFOAM (Open source Field Operation And Manipulation):''' an open-source C++ toolbox for solving the Navier–Stokes equations for fluid dynamics.		* '''OpenFOAM (Open source Field Operation And Manipulation):''' an open-source C++ toolbox for solving the Navier–Stokes equations for fluid dynamics.

		+	== Running on the CMR Hub ==
		+	Currently, an instance of the CMR can be accessed on https://cmrhub.cct.lsu.edu. Contact sbrandt@cct.lsu.edu if you need an account.

	== Installing & Running CMR ==		== Installing & Running CMR ==

@@ Line 104: / Line 104: @@
 #*#Model's Spack Package Name
 #*#Model's Version:
-  Example of JSON File Format:
+#Place the JSON File in "/science-models/JSONFiles/" directory
+  {
     "name": "''Model Name''",
@@ Line 110: / Line 114: @@
     "version": "''Model Version''"
+  }
 == References ==

@@ Line 99: / Line 99: @@
 === Instructions ===
-# Create a JSON File named "''Model's Name''_''Model's Version''.json" with your preferred text editor/IDE
+#Create a JSON File named "''Model's Name''_''Model's Version''.json" with your preferred text editor/IDE
-#* This file should detail the following:
+#*This file should detail the following:
-#*# Model's Name
+#*#Model's Name
-#*# Model's Spack Package Name
+#*#Model's Spack Package Name
 #*#Model's Version:
+ Example of JSON File Format:
+  {
     "name": "''Model Name''",
@@ Line 111: / Line 110: @@
     "version": "''Model Version''"
+  }
 #Place the JSON File in "/science-models/JSONFiles/" directory
-# Place the JSON File in "/science-models/JSONFiles/" directory
+#Run the CMR
-# Run the CMR
+#*The CMR should automatically detect the new models and will begin installing it on startup
 == References ==